Expression matrix(count)
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Metadata
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| CellBarcode | Sample | Age | nCount_RNA | nFeature_RNA | percent.mito | percent.ribo | Phase | CellType | CellType_rough | Stage |
|---|---|---|---|---|---|---|---|---|---|---|
| W6_AAACCTGAGATAGGAG-1 | W6 | W6 | 10964 | 3173 | 1.286 | 32.798 | G1 | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AAACCTGAGCGTCAAG-1 | W6 | W6 | 12647 | 3222 | 1.494 | 34.649 | G1 | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AAACCTGCACGTCAGC-1 | W6 | W6 | 17631 | 3815 | 1.384 | 37.06 | G1 | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AAACCTGCAGTAACGG-1 | W6 | W6 | 8210 | 2584 | 2.022 | 31.596 | G1 | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AAACCTGCATACTCTT-1 | W6 | W6 | 1946 | 1070 | 2.364 | 23.124 | S | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AAACCTGGTCGGCTCA-1 | W6 | W6 | 21724 | 4458 | 1.395 | 35.201 | G1 | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AAACCTGGTGGTCTCG-1 | W6 | W6 | 10594 | 2924 | 1.652 | 29.309 | G1 | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AAACCTGTCCATGCTC-1 | W6 | W6 | 14190 | 3495 | 1.875 | 31.938 | G1 | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AAACCTGTCTTGTTTG-1 | W6 | W6 | 8133 | 2968 | 3.037 | 14.927 | G1 | Epithelial cells | Epithelial cells | W6-W7 |
| W6_AAACGGGAGATGTAAC-1 | W6 | W6 | 3108 | 1478 | 4.569 | 22.394 | G1 | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AAACGGGAGGTACTCT-1 | W6 | W6 | 2559 | 1119 | 7.073 | 7.581 | G1 | Epithelial cells | Epithelial cells | W6-W7 |
| W6_AAACGGGTCGGATGGA-1 | W6 | W6 | 10439 | 3031 | 3.008 | 35.032 | G1 | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AAACGGGTCTTCATGT-1 | W6 | W6 | 4515 | 1791 | 1.351 | 29.989 | G1 | Endothelial cells | Endothelial cells | W6-W7 |
| W6_AAAGATGCAGCCACCA-1 | W6 | W6 | 5772 | 1913 | 3.136 | 27.235 | G1 | Immune cells | Immune cells | W6-W7 |
| W6_AAAGATGGTACCGAGA-1 | W6 | W6 | 11988 | 3471 | 1.31 | 31.156 | G1 | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AAAGCAAAGTCGTTTG-1 | W6 | W6 | 7464 | 2291 | 2.077 | 34.673 | G1 | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AAAGCAACAGGGATTG-1 | W6 | W6 | 7216 | 2421 | 2.231 | 28.728 | G1 | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AAAGCAAGTGCACGAA-1 | W6 | W6 | 10370 | 2939 | 3.626 | 33.076 | G1 | Epithelial cells | Epithelial cells | W6-W7 |
| W6_AAAGCAATCAGTCAGT-1 | W6 | W6 | 15767 | 3716 | 2.074 | 32.34 | G1 | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AAAGCAATCCTAGAAC-1 | W6 | W6 | 9107 | 2690 | 2.58 | 33.436 | G1 | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AAAGCAATCTGATTCT-1 | W6 | W6 | 10539 | 3163 | 2.125 | 29.13 | G1 | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AAAGTAGAGAATGTTG-1 | W6 | W6 | 5175 | 1952 | 2.319 | 35.884 | G1 | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AAAGTAGAGCTGCCCA-1 | W6 | W6 | 2141 | 1039 | 13.312 | 20.177 | G1 | Epithelial cells | Epithelial cells | W6-W7 |
| W6_AAAGTAGAGGCTCTTA-1 | W6 | W6 | 25641 | 5046 | 1.459 | 33.228 | G1 | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AAAGTAGCACGAGGTA-1 | W6 | W6 | 43355 | 6717 | 2.715 | 32.248 | G2M | Sertoli Precursor | Sertoli Precursor | W6-W7 |
| W6_AAAGTAGCAGACAGGT-1 | W6 | W6 | 14644 | 3720 | 1.81 | 28.332 | G2M | Sertoli Precursor | Sertoli Precursor | W6-W7 |
| W6_AAAGTAGCAGACGTAG-1 | W6 | W6 | 47740 | 6807 | 2.421 | 38.659 | G1 | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AAATGCCCACGAGGTA-1 | W6 | W6 | 10965 | 2839 | 1.176 | 38.833 | G1 | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AAATGCCCACGCGAAA-1 | W6 | W6 | 6207 | 2822 | 1.547 | 19.945 | G1 | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AAATGCCGTCGACTAT-1 | W6 | W6 | 10122 | 3027 | 1.946 | 26.23 | G1 | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AAATGCCGTGAGTGAC-1 | W6 | W6 | 4228 | 1611 | 0.142 | 23.675 | G1 | Epithelial cells | Epithelial cells | W6-W7 |
| W6_AAATGCCTCAGCTCTC-1 | W6 | W6 | 15100 | 3729 | 1.536 | 32.066 | G1 | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AAATGCCTCGCCAGCA-1 | W6 | W6 | 8191 | 2618 | 2.332 | 29.825 | G1 | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AACACGTAGTGCGTGA-1 | W6 | W6 | 1933 | 912 | 9.208 | 24.78 | G1 | Epithelial cells | Epithelial cells | W6-W7 |
| W6_AACACGTGTCAAAGCG-1 | W6 | W6 | 8130 | 2540 | 1.919 | 32.891 | G1 | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AACACGTGTCCGTCAG-1 | W6 | W6 | 2791 | 1487 | 6.915 | 12.182 | G1 | Endothelial cells | Endothelial cells | W6-W7 |
| W6_AACACGTTCCATTCTA-1 | W6 | W6 | 1483 | 786 | 4.922 | 30.748 | G1 | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AACACGTTCCGCATCT-1 | W6 | W6 | 10776 | 3220 | 1.995 | 26.837 | G1 | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AACCATGAGTCCAGGA-1 | W6 | W6 | 1414 | 884 | 6.011 | 19.802 | G1 | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AACCATGCACTATCTT-1 | W6 | W6 | 1326 | 756 | 0.151 | 22.7 | G1 | Epithelial cells | Epithelial cells | W6-W7 |
| W6_AACCATGGTCGCATCG-1 | W6 | W6 | 9800 | 2648 | 1.459 | 37.337 | G1 | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AACCGCGGTGTTCGAT-1 | W6 | W6 | 10198 | 2543 | 0.216 | 34.517 | G2M | Sertoli Precursor | Sertoli Precursor | W6-W7 |
| W6_AACGTTGCAGATCTGT-1 | W6 | W6 | 16307 | 3417 | 3.673 | 34.439 | G1 | Immune cells | Immune cells | W6-W7 |
| W6_AACGTTGGTATATCCG-1 | W6 | W6 | 12920 | 3590 | 2.515 | 31.362 | G1 | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AACGTTGGTTGCTCCT-1 | W6 | W6 | 1352 | 764 | 13.462 | 9.985 | G1 | Interstitial Precursor-2 | Interstitial Precursor | W6-W7 |
| W6_AACGTTGTCAAACCGT-1 | W6 | W6 | 2259 | 959 | 5.445 | 33.82 | G1 | Endothelial cells | Endothelial cells | W6-W7 |
| W6_AACTCAGAGGACAGCT-1 | W6 | W6 | 2403 | 1250 | 10.57 | 25.468 | S | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AACTCAGGTCTAACGT-1 | W6 | W6 | 12846 | 3605 | 2.398 | 31.076 | G2M | Sertoli Precursor | Sertoli Precursor | W6-W7 |
| W6_AACTCAGGTGCAGACA-1 | W6 | W6 | 5904 | 2111 | 3.032 | 29.522 | G1 | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AACTCAGTCATGTCTT-1 | W6 | W6 | 11342 | 3479 | 3.941 | 14.133 | G1 | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AACTCAGTCCAAAGTC-1 | W6 | W6 | 7386 | 2421 | 0.014 | 22.502 | G2M | Sertoli Precursor | Sertoli Precursor | W6-W7 |
| W6_AACTCCCAGTGACTCT-1 | W6 | W6 | 1215 | 690 | 0.658 | 29.053 | G1 | Endothelial cells | Endothelial cells | W6-W7 |
| W6_AACTCCCAGTTAGGTA-1 | W6 | W6 | 5592 | 1937 | 4.632 | 15.218 | G1 | Immune cells | Immune cells | W6-W7 |
| W6_AACTCCCCAGTTCATG-1 | W6 | W6 | 4200 | 1537 | 0.071 | 24.143 | G1 | Epithelial cells | Epithelial cells | W6-W7 |
| W6_AACTCCCGTGGAAAGA-1 | W6 | W6 | 14902 | 3638 | 2.704 | 33.801 | G2M | Sertoli Precursor | Sertoli Precursor | W6-W7 |
| W6_AACTCCCTCCATTCTA-1 | W6 | W6 | 8551 | 3240 | 1.789 | 28.079 | G2M | Sertoli Precursor | Sertoli Precursor | W6-W7 |
| W6_AACTCTTCATCCCATC-1 | W6 | W6 | 1143 | 661 | 0.0 | 27.647 | G1 | Epithelial cells | Epithelial cells | W6-W7 |
| W6_AACTCTTCATTTGCTT-1 | W6 | W6 | 1576 | 807 | 0.063 | 26.269 | G1 | Epithelial cells | Epithelial cells | W6-W7 |
| W6_AACTCTTGTAGGCTGA-1 | W6 | W6 | 13115 | 3181 | 1.334 | 37.629 | S | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AACTCTTTCCTTGACC-1 | W6 | W6 | 11192 | 3019 | 2.216 | 36.044 | G1 | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AACTCTTTCTGGCGTG-1 | W6 | W6 | 8674 | 2716 | 1.349 | 32.638 | G1 | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AACTCTTTCTTTAGGG-1 | W6 | W6 | 9601 | 2863 | 1.344 | 32.455 | G1 | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AACTGGTAGCGCTCCA-1 | W6 | W6 | 5433 | 1920 | 4.786 | 21.001 | G1 | Immune cells | Immune cells | W6-W7 |
| W6_AACTGGTAGTCCCACG-1 | W6 | W6 | 3006 | 1379 | 1.863 | 30.406 | G1 | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AACTGGTAGTGCGTGA-1 | W6 | W6 | 5360 | 2027 | 2.687 | 28.284 | G2M | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AACTGGTGTAGCTCCG-1 | W6 | W6 | 3965 | 1476 | 0.0 | 30.265 | G2M | Endothelial cells | Endothelial cells | W6-W7 |
| W6_AACTGGTGTAGTAGTA-1 | W6 | W6 | 4270 | 1587 | 0.843 | 39.157 | G1 | Smooth Muscle cells | Smooth Muscle cells | W6-W7 |
| W6_AACTGGTGTCAAAGCG-1 | W6 | W6 | 8913 | 2613 | 1.997 | 33.064 | G1 | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AACTGGTTCTTTAGGG-1 | W6 | W6 | 10676 | 2998 | 3.625 | 34.367 | G1 | Epithelial cells | Epithelial cells | W6-W7 |
| W6_AACTTTCAGCCCAGCT-1 | W6 | W6 | 21350 | 4461 | 4.314 | 36.248 | S | Epithelial cells | Epithelial cells | W6-W7 |
| W6_AACTTTCCACGGTTTA-1 | W6 | W6 | 8821 | 2982 | 1.576 | 25.371 | G2M | Sertoli Precursor | Sertoli Precursor | W6-W7 |
| W6_AACTTTCCAGGTCGTC-1 | W6 | W6 | 5524 | 2069 | 3.639 | 28.494 | G1 | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AACTTTCGTAACGACG-1 | W6 | W6 | 32016 | 4660 | 1.078 | 42.351 | G1 | Endothelial cells | Endothelial cells | W6-W7 |
| W6_AACTTTCGTTCGCGAC-1 | W6 | W6 | 8228 | 2170 | 0.024 | 26.458 | G1 | Epithelial cells | Epithelial cells | W6-W7 |
| W6_AACTTTCTCGGTCTAA-1 | W6 | W6 | 10716 | 3090 | 1.353 | 32.475 | G1 | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AAGACCTAGAAACCGC-1 | W6 | W6 | 2549 | 1202 | 0.078 | 23.029 | G1 | Epithelial cells | Epithelial cells | W6-W7 |
| W6_AAGACCTAGGCCCTTG-1 | W6 | W6 | 5808 | 2222 | 5.975 | 24.638 | G1 | Epithelial cells | Epithelial cells | W6-W7 |
| W6_AAGACCTAGTTCGCAT-1 | W6 | W6 | 9640 | 2900 | 1.058 | 32.5 | G1 | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AAGACCTCATTCCTGC-1 | W6 | W6 | 2456 | 945 | 0.041 | 31.27 | S | Epithelial cells | Epithelial cells | W6-W7 |
| W6_AAGACCTTCCCACTTG-1 | W6 | W6 | 1339 | 780 | 10.68 | 6.273 | G2M | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AAGCCGCAGACTTGAA-1 | W6 | W6 | 9751 | 2802 | 1.446 | 33.73 | G1 | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AAGCCGCAGTGTACGG-1 | W6 | W6 | 12459 | 3097 | 1.453 | 34.746 | G1 | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AAGCCGCTCTCTGTCG-1 | W6 | W6 | 4945 | 1930 | 4.671 | 21.193 | G1 | Epithelial cells | Epithelial cells | W6-W7 |
| W6_AAGGAGCCACGGCTAC-1 | W6 | W6 | 5959 | 2158 | 2.92 | 32.656 | S | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AAGGAGCCACGTCTCT-1 | W6 | W6 | 12762 | 3499 | 4.161 | 20.804 | G2M | Sertoli Precursor | Sertoli Precursor | W6-W7 |
| W6_AAGGAGCTCGAACGGA-1 | W6 | W6 | 6439 | 2264 | 2.873 | 24.911 | G1 | Endothelial cells | Endothelial cells | W6-W7 |
| W6_AAGGCAGCAAAGTGCG-1 | W6 | W6 | 5560 | 1418 | 0.072 | 8.669 | G1 | Epithelial cells | Epithelial cells | W6-W7 |
| W6_AAGGCAGCAGGAATCG-1 | W6 | W6 | 8459 | 2740 | 1.442 | 31.765 | G1 | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AAGGCAGTCCAGAGGA-1 | W6 | W6 | 8404 | 2628 | 2.118 | 32.96 | G1 | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AAGGCAGTCTGGGCCA-1 | W6 | W6 | 8619 | 2600 | 1.543 | 33.217 | G1 | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AAGGTTCCAACACCTA-1 | W6 | W6 | 5316 | 1553 | 2.728 | 21.031 | G1 | Immune cells | Immune cells | W6-W7 |
| W6_AAGGTTCGTTAAGTAG-1 | W6 | W6 | 40392 | 6372 | 3.639 | 38.322 | G1 | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AAGGTTCTCACATACG-1 | W6 | W6 | 14083 | 3400 | 2.414 | 36.051 | S | Sertoli Precursor | Sertoli Precursor | W6-W7 |
| W6_AAGTCTGAGACGCACA-1 | W6 | W6 | 11183 | 2997 | 2.638 | 35.411 | S | Epithelial cells | Epithelial cells | W6-W7 |
| W6_AAGTCTGAGCGGATCA-1 | W6 | W6 | 4396 | 1784 | 4.777 | 28.708 | G1 | Epithelial cells | Epithelial cells | W6-W7 |
| W6_AAGTCTGCATCCGTGG-1 | W6 | W6 | 2880 | 1258 | 0.069 | 29.479 | G1 | Epithelial cells | Epithelial cells | W6-W7 |
| W6_AAGTCTGGTCCCGACA-1 | W6 | W6 | 10272 | 2803 | 2.453 | 33.684 | G1 | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AAGTCTGGTTCGGGCT-1 | W6 | W6 | 10470 | 3040 | 1.547 | 31.643 | G1 | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AAGTCTGTCAGGCAAG-1 | W6 | W6 | 7362 | 2411 | 1.263 | 32.287 | G1 | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
| W6_AATCCAGCAAGACACG-1 | W6 | W6 | 11260 | 3134 | 1.838 | 28.41 | G1 | Sertoli-Interstitial Progenitor | Sertoli-Interstitial Progenitor | W6-W7 |
Differentially expressed genes
Click DEGs_AllCells to download the differentially expressed genes of each cell type in the atlas 'AllCells' on the 'Differentially Expressed Genes' page.
Click DEGs_GermCells to download the differentially expressed genes of each cell type in the atlas 'GermCells' on the 'Differentially Expressed Genes' page.
Click DEGs_GermCellspart1 to download the differentially expressed genes of each cell type in the atlas 'GermCells_part1' on the 'Differentially Expressed Genes' page.
Click DEGs_GermCellspart1_UndiffSpg to download the differentially expressed genes of four undifferentiated spermatogonia in the atlas 'GermCells_part1' on the 'Differentially Expressed Genes' page.
Click DEGs_GermCellspart2 to download the differentially expressed genes of each cell type in the atlas 'GermCells_part2' on the 'Differentially Expressed Genes' page.
Click DEGs_GermCellspart3 to download the differentially expressed genes of each cell type in the atlas 'GermCells_part3' on the 'Differentially Expressed Genes' page.
Click DEGs_SomaticCells to download the differentially expressed genes of each cell type in the atlas 'SomaticCells' on the 'Differentially Expressed Genes' page.
Click DEGs_GermCells to download the differentially expressed genes of each cell type in the atlas 'GermCells' on the 'Differentially Expressed Genes' page.
Click DEGs_GermCellspart1 to download the differentially expressed genes of each cell type in the atlas 'GermCells_part1' on the 'Differentially Expressed Genes' page.
Click DEGs_GermCellspart1_UndiffSpg to download the differentially expressed genes of four undifferentiated spermatogonia in the atlas 'GermCells_part1' on the 'Differentially Expressed Genes' page.
Click DEGs_GermCellspart2 to download the differentially expressed genes of each cell type in the atlas 'GermCells_part2' on the 'Differentially Expressed Genes' page.
Click DEGs_GermCellspart3 to download the differentially expressed genes of each cell type in the atlas 'GermCells_part3' on the 'Differentially Expressed Genes' page.
Click DEGs_SomaticCells to download the differentially expressed genes of each cell type in the atlas 'SomaticCells' on the 'Differentially Expressed Genes' page.
Gene sets
Click Download TF to download the transcription factors.
Click Download SP to download the cell surface proteins.
Click Download Enzyme to download the enzymes.
Click Download CCgenes to download the cell_cycle_related genes.